Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLCB1 ENSPTRG00000013241

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Description

phospholipase C beta 1 [Source:VGNC Symbol;Acc:VGNC:6242]

Location

Chromosome 20: 8,007,310-8,774,649 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants), 312 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024610.5	PLCB1-203	3651	1216aa	ENSPTRP00000022705.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YBZ2 K7BA21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086679.1	PLCB1-205	6467	1136aa	ENSPTRP00000073248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8D6 A0A6D2WK12	-
ENSPTRT00000090017.1	PLCB1-204	3546	1181aa	ENSPTRP00000072843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8K3	-
ENSPTRT00000080927.1	PLCB1-202	3522	1173aa	ENSPTRP00000078267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XW72 K7DLT5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000100874.1	PLCB1-201	747	248aa	ENSPTRP00000091306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPY6 A0A6D2WTA3	-

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Summary

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