Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS16 ENSPTRG00000013186

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Description

VPS16 core subunit of CORVET and HOPS complexes [Source:VGNC Symbol;Acc:VGNC:10024]

Location

Chromosome 20: 2,699,525-2,725,923 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 2 transcripts (splice variants) and 199 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109688.1	VPS16-202	2556	851aa	ENSPTRP00000085856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9E5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000024487.4	VPS16-201	2763	839aa	ENSPTRP00000022586.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y6E8 H2QJU9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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