Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNPH ENSPTRG00000013160

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Description

syntaphilin [Source:VGNC Symbol;Acc:VGNC:6264]

Location

Chromosome 20: 1,129,993-1,210,611 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 4 transcripts (splice variants), 113 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096431.1	SNPH-201	2741	556aa	ENSPTRP00000081040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000085441.1	SNPH-204	10463	525aa	ENSPTRP00000082962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T179	-
ENSPTRT00000024419.4	SNPH-203	8613	538aa	ENSPTRP00000022525.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8MS06 A0A6D2XIL3	-
ENSPTRT00000059351.3	SNPH-202	1566	521aa	ENSPTRP00000052484.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R964	-

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Summary

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