Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG4B ENSPTRG00000013128

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Description

autophagy related 4B cysteine peptidase [Source:VGNC Symbol;Acc:VGNC:99]

Location

Chromosome 2B: 132,855,463-132,892,255 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024367.6	ATG4B-201	3263	393aa	ENSPTRP00000022479.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y5W7 H2QJR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000082382.1	ATG4B-202	267	88aa	ENSPTRP00000093516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8IPB1 A0A6D2X9J9	-
ENSPTRT00000101885.1	ATG4B-203	237	78aa	ENSPTRP00000089722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKG8	-

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Summary

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