Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB2 ENSPTRG00000012779

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Description

SATB homeobox 2 [Source:VGNC Symbol;Acc:VGNC:2807]

Location

Chromosome 2B: 89,852,995-90,045,604 reverse strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 4 transcripts (splice variants), 264 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105261.1	SATB2-202	9008	733aa	ENSPTRP00000080249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SX19 A0A6D2WX59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000087967.1	SATB2-201	6858	733aa	ENSPTRP00000081539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SX19 A0A6D2WX59	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000023678.7	SATB2-203	2025	674aa	ENSPTRP00000021836.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W946 H2QJ76	-
ENSPTRT00000101268.1	SATB2-204	1848	615aa	ENSPTRP00000073648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8N4U9 A0A6D2Y5E4	-

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Summary

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