Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDCA7 ENSPTRG00000012645

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Description

cell division cycle associated 7 [Source:VGNC Symbol;Acc:VGNC:128]

Location

Chromosome 2B: 63,646,067-63,660,155 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 4 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000023430.6	CDCA7-201	2734	450aa	ENSPTRP00000021608.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WTH9 H2QIZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000093639.1	CDCA7-202	2494	371aa	ENSPTRP00000063938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X987 K7BRT4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000103977.1	CDCA7-203	990	329aa	ENSPTRP00000089957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TL38 A0A6D2Y8C7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000088025.1	CDCA7-204	714	237aa	ENSPTRP00000069065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RXL3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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