Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: RAB3GAP1 ENSPTRG00000012491

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Description

RAB3 GTPase activating protein catalytic subunit 1 [Source:VGNC Symbol;Acc:VGNC:2796]

Location

Chromosome 2B: 24,687,895-24,809,868 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000023177.5	RAB3GAP1-201	4518	988aa	ENSPTRP00000021370.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WGP6 H2QIR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087558.1	RAB3GAP1-202	4495	981aa	ENSPTRP00000078374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WN50 K7BLE5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000085783.1	RAB3GAP1-203	2808	935aa	ENSPTRP00000078110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMB1 A0A6D2WAH6	-
ENSPTRT00000088771.1	RAB3GAP1-204	2595	864aa	ENSPTRP00000092911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUK7	-

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Summary

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