Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MDH1 ENSPTRG00000011974

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Description

malate dehydrogenase 1 [Source:VGNC Symbol;Acc:VGNC:2925]

Location

Chromosome 2A: 64,947,220-64,965,232 forward strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 7 transcripts (splice variants), 298 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000094979.1	MDH1-204	1176	352aa	ENSPTRP00000088176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TG06 A0A6D2WR97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000111476.1	MDH1-201	1081	334aa	ENSPTRP00000070246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZV0 A0A6D2XLA4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000022288.5	MDH1-206	990	329aa	ENSPTRP00000020567.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QHZ3	-
ENSPTRT00000102900.1	MDH1-202	633	210aa	ENSPTRP00000079063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQ69 A0A6D2WC83	-
ENSPTRT00000095732.1	MDH1-203	510	169aa	ENSPTRP00000084732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T699 A0A6D2WZ14	-
ENSPTRT00000095021.1	MDH1-207	510	169aa	ENSPTRP00000092879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUH7	-
ENSPTRT00000087736.1	MDH1-205	264	87aa	ENSPTRP00000083334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T390 A0A6D2XH58	-

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Summary

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