Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EFR3B ENSPTRG00000011720

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Description

EFR3 homolog B [Source:VGNC Symbol;Acc:VGNC:316]

Location

Chromosome 2A: 25,546,745-25,663,174 forward strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 4 transcripts (splice variants), 255 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000021825.6	EFR3B-203	2460	819aa	ENSPTRP00000020132.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QHJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000090299.1	EFR3B-204	7590	669aa	ENSPTRP00000082168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZY3 A0A6D2WRX4	-
ENSPTRT00000079671.1	EFR3B-201	7449	817aa	ENSPTRP00000080999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVI1 A0A6D2WLY5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000106550.1	EFR3B-202	7240	782aa	ENSPTRP00000063304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RF65 A0A6D2W6T9	-

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Summary

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