Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D17 ENSPTRG00000011325

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Description

TBC1 domain family member 17 [Source:VGNC Symbol;Acc:VGNC:13530]

Location

Chromosome 19: 52,114,159-52,127,549 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 6 transcripts (splice variants), 189 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000021059.3	TBC1D17-201	2372	648aa	ENSPTRP00000019446.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X4C2 H2QGW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000103990.1	TBC1D17-202	1848	615aa	ENSPTRP00000078531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPT8 A0A6D2XK19	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077652.1	TBC1D17-204	1818	605aa	ENSPTRP00000081264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWD6	-
ENSPTRT00000098693.1	TBC1D17-206	834	277aa	ENSPTRP00000092336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSX7	-
ENSPTRT00000104596.1	TBC1D17-205	672	223aa	ENSPTRP00000086925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TCJ8	-
ENSPTRT00000103972.1	TBC1D17-203	228	75aa	ENSPTRP00000084172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5N7 A0A6D2XLB6	-

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Summary

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