Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PNKP ENSPTRG00000011323

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Description

polynucleotide kinase 3'-phosphatase [Source:VGNC Symbol;Acc:VGNC:2440]

Location

Chromosome 19: 52,097,965-52,104,659 reverse strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 6 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000091593.1	PNKP-202	1860	521aa	ENSPTRP00000065708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XY95 K7BAU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000106888.1	PNKP-203	1539	512aa	ENSPTRP00000080745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUW0	-
ENSPTRT00000077947.1	PNKP-201	1473	490aa	ENSPTRP00000067198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RR65	-
ENSPTRT00000021054.5	PNKP-204	1473	490aa	ENSPTRP00000019441.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X1K9 H2QGW6	-
ENSPTRT00000081459.1	PNKP-205	1458	485aa	ENSPTRP00000063283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RF69 A0A6D2VUU9	-
ENSPTRT00000101906.1	PNKP-206	525	174aa	ENSPTRP00000087402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TEX0 A0A6D2WEC0	-

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Summary

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