Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PPFIA3 ENSPTRG00000011280

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Description

PTPRF interacting protein alpha 3 [Source:VGNC Symbol;Acc:VGNC:7565]

Location

Chromosome 19: 51,340,380-51,372,027 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 4 transcripts (splice variants), 280 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000085655.1	PPFIA3-203	3714	1237aa	ENSPTRP00000074089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SB68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000048848.4	PPFIA3-202	4737	1194aa	ENSPTRP00000041968.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WCI6 H2R188	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000076995.1	PPFIA3-201	4701	1185aa	ENSPTRP00000092213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSK6 A0A6D2VT61	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000102449.1	PPFIA3-204	1959	652aa	ENSPTRP00000071534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3F7 A0A6D2VUY0	-

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Summary

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