Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSPTRG00000010721

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Description

UPF1 RNA helicase and ATPase [Source:VGNC Symbol;Acc:VGNC:8692]

Location

Chromosome 19: 19,928,938-19,965,291 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 2 transcripts (splice variants), 216 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000094219.1	UPF1-201	5394	1129aa	ENSPTRP00000069011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWB5 A0A6D2XPN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000019773.5	UPF1-202	3366	1121aa	ENSPTRP00000018289.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QFU1	-

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Summary

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