Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TJP3 ENSPTRG00000010274

.

Description

tight junction protein 3 [Source:VGNC Symbol;Acc:VGNC:2229]

Location

Chromosome 19: 3,872,539-3,914,201 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 2 transcripts (splice variants), 201 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000018867.6	TJP3-202	3112	928aa	ENSPTRP00000017461.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X7T2 H2QEZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000093533.1	TJP3-201	3352	919aa	ENSPTRP00000074846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCZ7 A0A6D2XPY8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.