Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALCOCO2 ENSPTRG00000009363

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Description

calcium binding and coiled-coil domain 2 [Source:VGNC Symbol;Acc:VGNC:9165]

Location

Chromosome 17: 8,950,770-8,983,467 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000076877.1	CALCOCO2-202	1404	467aa	ENSPTRP00000086304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TAR8 A0A6D2W420	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000017189.5	CALCOCO2-201	2272	446aa	ENSPTRP00000015914.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WSK2 G2HF82	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000086224.1	CALCOCO2-203	1215	404aa	ENSPTRP00000066264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNJ6 A0A6D2X0Q1	-

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Summary

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