Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP6V0A1 ENSPTRG00000009202

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Description

ATPase H+ transporting V0 subunit a1 [Source:VGNC Symbol;Acc:VGNC:9151]

Location

Chromosome 17: 15,040,310-15,104,283 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 3 transcripts (splice variants), 277 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077870.1	ATP6V0A1-201	4150	838aa	ENSPTRP00000089223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XIA2 K7AA39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000016932.6	ATP6V0A1-202	4147	837aa	ENSPTRP00000053075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WJL5 H2R9Q4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000106275.1	ATP6V0A1-203	2385	794aa	ENSPTRP00000078255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMQ4 A0A6D2XUN9	-

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Summary

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