Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: FBXL20 ENSPTRG00000009090

.

Description

F-box and leucine rich repeat protein 20 [Source:VGNC Symbol;Acc:VGNC:12134]

Location

Chromosome 17: 18,227,725-18,353,385 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 4 transcripts (splice variants), 239 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000016739.5	FBXL20-201	2512	438aa	ENSPTRP00000015488.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WXS9 H2QCU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000082984.1	FBXL20-203	1599	436aa	ENSPTRP00000081940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SY70 A0A6D2XEA3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000065864.3	FBXL20-202	1505	404aa	ENSPTRP00000057433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XXW3 H2RCK0	-
ENSPTRT00000106311.1	FBXL20-204	1293	430aa	ENSPTRP00000087514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TE52	-

.

Summary

.

.