Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RHOT1 ENSPTRG00000008986

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Description

ras homolog family member T1 [Source:VGNC Symbol;Acc:VGNC:9562]

Location

Chromosome 17: 25,005,407-25,088,844 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 5 transcripts (splice variants), 277 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096446.1	RHOT1-205	3439	752aa	ENSPTRP00000093402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000016567.4	RHOT1-201	3298	704aa	ENSPTRP00000052990.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7BZ39	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000094393.1	RHOT1-202	3202	672aa	ENSPTRP00000068303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7AT87	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000080780.1	RHOT1-203	3175	650aa	ENSPTRP00000081672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SYK2 A0A6D2X3A4	-
ENSPTRT00000086964.1	RHOT1-204	3079	631aa	ENSPTRP00000087210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7D6R4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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