Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM6B ENSPTRG00000008710

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Description

lysine demethylase 6B [Source:VGNC Symbol;Acc:VGNC:9345]

Location

Chromosome 17: 8,125,791-8,141,770 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 3 transcripts (splice variants), 246 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000075604.2	KDM6B-202	7797	1679aa	ENSPTRP00000060792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WNK0 H2RGZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000016047.4	KDM6B-201	7335	1640aa	ENSPTRP00000014849.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XRB6 H2QC56	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000082607.1	KDM6B-203	1611	536aa	ENSPTRP00000088645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TH99	-

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Summary

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