Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABR ENSPTRG00000008518

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Description

ABR activator of RhoGEF and GTPase [Source:VGNC Symbol;Acc:VGNC:54163]

Location

Chromosome 17: 961,169-1,179,685 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000015710.5	ABR-205	2523	840aa	ENSPTRP00000014533.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QBT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000085485.1	ABR-203	2514	837aa	ENSPTRP00000077998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SM42	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000102980.1	ABR-204	2499	832aa	ENSPTRP00000079927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSL5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000083824.1	ABR-202	2412	803aa	ENSPTRP00000062121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBV4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000103843.1	ABR-201	1812	603aa	ENSPTRP00000068861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVW0	-

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Summary

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