Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: VPS4A ENSPTRG00000008277

.

Description

vacuolar protein sorting 4 homolog A [Source:VGNC Symbol;Acc:VGNC:110043]

Location

Chromosome 16: 60,244,739-60,258,503 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 3 transcripts (splice variants), 213 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000098659.1	VPS4A-201	1518	505aa	ENSPTRP00000090753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TNE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000015262.6	VPS4A-202	2226	437aa	ENSPTRP00000053458.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WJH4 K7BC82	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000094081.1	VPS4A-203	1332	443aa	ENSPTRP00000067841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RT28	-

.

Summary

.

.