Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF40 ENSPTRG00000008015

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Description

ring finger protein 40 [Source:VGNC Symbol;Acc:VGNC:9101]

Location

Chromosome 16: 29,660,089-29,674,199 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000097662.1	RNF40-201	5378	1001aa	ENSPTRP00000088375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XQH2 K7B594	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000014789.4	RNF40-202	2886	961aa	ENSPTRP00000013697.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XEK2 H2QAY5	-
ENSPTRT00000097178.1	RNF40-203	2706	901aa	ENSPTRP00000088921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TI27 A0A6D2XYT1	-
ENSPTRT00000104622.1	RNF40-204	702	233aa	ENSPTRP00000063020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3REC1	-

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Summary

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