Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP2A1 ENSPTRG00000007941

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Description

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:VGNC Symbol;Acc:VGNC:9020]

Location

Chromosome 16: 28,449,288-28,479,873 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 4 transcripts (splice variants), 180 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000103678.1	ATP2A1-204	3207	1068aa	ENSPTRP00000082742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T0L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000108450.1	ATP2A1-201	4107	994aa	ENSPTRP00000072236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5K1 A0A663DHA2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000096873.1	ATP2A1-202	3066	1021aa	ENSPTRP00000074006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBY9	-
ENSPTRT00000014652.5	ATP2A1-203	3009	1002aa	ENSPTRP00000013574.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QAV0	-

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Summary

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