Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SERF2 ENSPTRG00000007004

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Description

small EDRK-rich factor 2 [Source:VGNC Symbol;Acc:VGNC:13421]

Location

Chromosome 15: 24,379,054-24,386,420 forward strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 4 transcripts (splice variants), 94 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012926.6	SERF2-201	638	170aa	ENSPTRP00000011967.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W2I9 H2Q9B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095975.1	SERF2-204	399	132aa	ENSPTRP00000077960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2HI35	-
ENSPTRT00000095669.1	SERF2-202	327	108aa	ENSPTRP00000082356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8NTS0 A0A6D2WAZ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000092423.1	SERF2-203	129	42aa	ENSPTRP00000089850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKS3 A0A6D2X3B1	-

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Summary

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