Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TP53BP1 ENSPTRG00000006994

.

Description

tumor protein p53 binding protein 1 [Source:VGNC Symbol;Acc:VGNC:1588]

Location

Chromosome 15: 23,990,003-24,097,599 reverse strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 4 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105167.1	TP53BP1-201	10360	1977aa	ENSPTRP00000067532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RS52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097654.1	TP53BP1-202	10514	1972aa	ENSPTRP00000074863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000012904.5	TP53BP1-203	5877	1958aa	ENSPTRP00000011947.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q9A7	-
ENSPTRT00000086652.1	TP53BP1-204	5784	1927aa	ENSPTRP00000080110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SU67	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.