Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TJP1 ENSPTRG00000006846

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Description

tight junction protein 1 [Source:VGNC Symbol;Acc:VGNC:13429]

Location

Chromosome 15: 9,931,359-10,072,960 forward strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 4 transcripts (splice variants), 282 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012641.7	TJP1-201	7156	1748aa	ENSPTRP00000011701.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XCU8 H2Q923	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086182.1	TJP1-202	6916	1668aa	ENSPTRP00000087093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TCW7 A0A6D2VUN2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000086853.1	TJP1-204	6622	1692aa	ENSPTRP00000066146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RN66 A0A6D2XY81	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000082198.1	TJP1-203	1152	383aa	ENSPTRP00000073727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9K4 A0A6D2VUU6	-

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Summary

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