Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BRF1 ENSPTRG00000006786

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Description

BRF1 RNA polymerase III transcription initiation factor subunit [Source:VGNC Symbol;Acc:VGNC:7642]

Location

Chromosome 14: 90,596,851-90,677,159 reverse strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 5 transcripts (splice variants), 213 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012530.6	BRF1-204	1977	658aa	ENSPTRP00000011599.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q908	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095717.1	BRF1-201	4070	584aa	ENSPTRP00000090568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TMV7 A0A6D2XLW0	-
ENSPTRT00000083634.1	BRF1-205	1953	650aa	ENSPTRP00000073877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9Z4 A0A6D2XY92	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000093214.1	BRF1-202	558	185aa	ENSPTRP00000088435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGP0 A0A6D2WDQ1	-
ENSPTRT00000100369.1	BRF1-203	411	136aa	ENSPTRP00000093867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TXP7	-

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Summary

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