Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DCAF4 ENSPTRG00000006507

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Description

DDB1 and CUL4 associated factor 4 [Source:VGNC Symbol;Acc:VGNC:3444]

Location

Chromosome 14: 57,450,274-57,483,485 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 3 transcripts (splice variants), 91 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000079437.1	DCAF4-201	2552	495aa	ENSPTRP00000083959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3Z7 A0A6D2WG64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000098435.1	DCAF4-202	2372	435aa	ENSPTRP00000068499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUV0 A0A6D2VZN7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000046440.4	DCAF4-203	978	325aa	ENSPTRP00000046782.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X6S6 H2R492	-

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Summary

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