Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX6 ENSPTRG00000006253

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Description

sorting nexin 6 [Source:VGNC Symbol;Acc:VGNC:3312]

Location

Chromosome 14: 18,469,097-18,536,878 reverse strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000011469.3	SNX6-201	2019	418aa	ENSPTRP00000010612.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q859	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000085316.1	SNX6-202	1218	405aa	ENSPTRP00000080919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVA3	-
ENSPTRT00000088744.1	SNX6-204	510	169aa	ENSPTRP00000082991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T177 A0A6D2XBY1	-
ENSPTRT00000101581.1	SNX6-203	501	166aa	ENSPTRP00000076053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGB1	-
ENSPTRT00000085973.1	SNX6-205	399	132aa	ENSPTRP00000083688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T387 A0A6D2XQB1	-

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Summary

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