Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DCLK1 ENSPTRG00000005778

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Description

doublecortin like kinase 1 [Source:VGNC Symbol;Acc:VGNC:5054]

Location

Chromosome 13: 20,533,599-20,884,756 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 5 transcripts (splice variants), 287 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108106.1	DCLK1-201	2242	740aa	ENSPTRP00000083255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T205 A0A6D2XGR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095855.1	DCLK1-202	6272	433aa	ENSPTRP00000082775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T0M5 A0A6D2W199	-
ENSPTRT00000087612.1	DCLK1-204	4975	363aa	ENSPTRP00000066680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPV1 A0A6D2W692	-
ENSPTRT00000010635.5	DCLK1-203	2209	729aa	ENSPTRP00000009841.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YBG1 H2Q7F0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000088681.1	DCLK1-205	405	134aa	ENSPTRP00000082495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZU3	-

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Summary

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