Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HSPH1 ENSPTRG00000005760

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Description

heat shock protein family H (Hsp110) member 1 [Source:VGNC Symbol;Acc:VGNC:5067]

Location

Chromosome 13: 15,887,819-15,913,283 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 4 transcripts (splice variants), 151 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000010595.3	HSPH1-201	3709	858aa	ENSPTRP00000009802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WX12 H2Q7D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000082212.1	HSPH1-202	3577	814aa	ENSPTRP00000090593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TMX8 A0A6D2Y572	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000101073.1	HSPH1-204	2541	846aa	ENSPTRP00000072094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S526	-
ENSPTRT00000095665.1	HSPH1-203	2349	782aa	ENSPTRP00000087407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TEX4 A0A6D2VVZ9	-

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Summary

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