Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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- Structural variants
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Gene: UBL3 ENSPTRG00000005751

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Description

ubiquitin like 3 [Source:VGNC Symbol;Acc:VGNC:5130]

Location

Chromosome 13: 14,516,925-14,603,001 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 4 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000067250.3	UBL3-201	4371	117aa	ENSPTRP00000058837.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y2H8 H2RDG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000105084.1	UBL3-204	354	117aa	ENSPTRP00000091194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPM2	-
ENSPTRT00000082952.1	UBL3-202	351	116aa	ENSPTRP00000062989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RE93	-
ENSPTRT00000094663.1	UBL3-203	345	114aa	ENSPTRP00000074759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SD23	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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