Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: RNF17 ENSPTRG00000005713

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Description

ring finger protein 17 [Source:VGNC Symbol;Acc:VGNC:5103]

Location

Chromosome 13: 9,407,553-9,521,296 forward strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 4 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000010525.6	RNF17-201	5356	1620aa	ENSPTRP00000009737.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q7A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086037.1	RNF17-202	4584	1527aa	ENSPTRP00000083635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T439	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000082907.1	RNF17-204	2091	630aa	ENSPTRP00000084201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T4P5 A0A6D2WME6	-
ENSPTRT00000085192.1	RNF17-203	1962	653aa	ENSPTRP00000072809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6Z2 A0A6D2VW16	-

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Summary

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