Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM2B ENSPTRG00000005560

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Description

lysine demethylase 2B [Source:VGNC Symbol;Acc:VGNC:8429]

Location

Chromosome 12: 124,741,322-124,930,774 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 6 transcripts (splice variants), 305 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000010204.6	KDM2B-202	5299	1336aa	ENSPTRP00000009437.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XF37 H2Q729	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108269.1	KDM2B-201	5219	1265aa	ENSPTRP00000084542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5P5 A0A6D2WNL5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000094201.1	KDM2B-203	1680	559aa	ENSPTRP00000078751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQF7 A0A6D2XJZ7	-
ENSPTRT00000084349.1	KDM2B-204	1524	507aa	ENSPTRP00000070109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZE7 A0A6D2YBV0	-
ENSPTRT00000083814.1	KDM2B-205	372	123aa	ENSPTRP00000063617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RG55 A0A6D2XHA8	-
ENSPTRT00000086084.1	KDM2B-206	358	104aa	ENSPTRP00000084985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6W1 A0A6D2WEC9	-

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Summary

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