Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: RNF10 ENSPTRG00000005541

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Description

ring finger protein 10 [Source:VGNC Symbol;Acc:VGNC:5573]

Location

Chromosome 12: 123,782,610-123,833,899 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 3 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000010165.4	RNF10-201	3454	816aa	ENSPTRP00000009400.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W5B5 H2Q715	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000098821.1	RNF10-203	3516	84aa	ENSPTRP00000077588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKK9 A0A6D2WPW9	-
ENSPTRT00000098720.1	RNF10-202	2607	606aa	ENSPTRP00000090601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TNT5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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