Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
- Gene history

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Gene: APAF1 ENSPTRG00000005335

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Description

apoptotic peptidase activating factor 1 [Source:VGNC Symbol;Acc:VGNC:4926]

Location

Chromosome 12: 101,426,107-101,515,592 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 4 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000048551.3	APAF1-201	7335	1248aa	ENSPTRP00000042795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R1S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104490.1	APAF1-202	7206	1205aa	ENSPTRP00000070780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1C0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000086167.1	APAF1-203	3492	1163aa	ENSPTRP00000083858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3Q9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000109735.1	APAF1-204	1017	338aa	ENSPTRP00000062758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8N0H1 A0A6D2X4F2	-

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Summary

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