Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PPFIA2 ENSPTRG00000005265

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Description

PTPRF interacting protein alpha 2 [Source:VGNC Symbol;Acc:VGNC:8493]

Location

Chromosome 12: 83,703,456-84,218,554 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 6 transcripts (splice variants), 216 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000098626.1	PPFIA2-204	3768	1255aa	ENSPTRP00000062412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000066851.3	PPFIA2-201	4909	1158aa	ENSPTRP00000058428.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RD78	-
ENSPTRT00000092164.1	PPFIA2-202	3738	1245aa	ENSPTRP00000065427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RL67	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000109744.1	PPFIA2-205	3705	1234aa	ENSPTRP00000092251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TTE0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000079730.1	PPFIA2-203	3693	1230aa	ENSPTRP00000092501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TTE9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000110215.1	PPFIA2-206	246	81aa	ENSPTRP00000080330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUT5 A0A6D2WLP3	-

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Summary

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