Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALCOCO1 ENSPTRG00000005024

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Description

calcium binding and coiled-coil domain 1 [Source:VGNC Symbol;Acc:VGNC:5314]

Location

Chromosome 12: 36,049,331-36,066,074 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 2 transcripts (splice variants), 252 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000044463.5	CALCOCO1-201	3267	691aa	ENSPTRP00000043174.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W2C2 H2R201	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000083793.1	CALCOCO1-202	1821	606aa	ENSPTRP00000063546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFY5 A0A6D2WN63	-

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Summary

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