Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN6 ENSPTRG00000004601

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Description

protein tyrosine phosphatase non-receptor type 6 [Source:VGNC Symbol;Acc:VGNC:5554]

Location

Chromosome 12: 7,266,297-7,283,710 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000008510.6	PTPN6-201	2508	597aa	ENSPTRP00000050501.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VU38 H2R7K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000101747.1	PTPN6-202	3489	595aa	ENSPTRP00000062176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JEF7 A0A6D2VTD8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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