Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ERC1 ENSPTRG00000004515

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Description

ELKS/RAB6-interacting/CAST family member 1 [Source:VGNC Symbol;Acc:VGNC:8596]

Location

Chromosome 12: 1,081,297-1,623,042 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 6 transcripts (splice variants), 276 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000090836.1	ERC1-204	3363	1120aa	ENSPTRP00000081117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVS2 A0A6D2WYZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097332.1	ERC1-205	3351	1116aa	ENSPTRP00000093470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TW23 A0A6D2WCF9	-
ENSPTRT00000094125.1	ERC1-206	3267	1088aa	ENSPTRP00000068078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XWU5 K7A4Y1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000008366.6	ERC1-203	3261	1086aa	ENSPTRP00000007729.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XJV9 H2Q567	-
ENSPTRT00000103361.1	ERC1-201	2868	955aa	ENSPTRP00000075799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SFJ1	-
ENSPTRT00000087091.1	ERC1-202	2163	720aa	ENSPTRP00000062479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCX6 A0A6D2Y229	-

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Summary

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