Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARCN1 ENSPTRG00000004350

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Description

archain 1 [Source:VGNC Symbol;Acc:VGNC:3215]

Location

Chromosome 11: 119,022,843-119,053,358 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 5 transcripts (splice variants) and 229 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000094313.1	ARCN1-204	3881	552aa	ENSPTRP00000078754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SP04 A0A6D2X2C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000008080.5	ARCN1-201	3923	511aa	ENSPTRP00000007459.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XTU0 H2Q4W6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000089657.1	ARCN1-202	3634	423aa	ENSPTRP00000072490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WGP2 K7CTJ3	-
ENSPTRT00000078420.1	ARCN1-205	579	192aa	ENSPTRP00000074290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SB65	-
ENSPTRT00000086126.1	ARCN1-203	252	83aa	ENSPTRP00000063924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGY8 A0A6D2XVK9	-

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Summary

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