Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SIK3 ENSPTRG00000004317

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Description

SIK family kinase 3 [Source:VGNC Symbol;Acc:VGNC:1005]

Location

Chromosome 11: 117,267,262-117,519,360 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 3 transcripts (splice variants), 220 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000055185.3	SIK3-202	3966	1321aa	ENSPTRP00000047628.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XXU3 H2R4Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000092661.1	SIK3-201	4084	1280aa	ENSPTRP00000084835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6G4	-
ENSPTRT00000101046.1	SIK3-203	3786	1261aa	ENSPTRP00000088169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TH17 A0A6D2XRQ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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