Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RTN3 ENSPTRG00000003809

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Description

reticulon 3 [Source:VGNC Symbol;Acc:VGNC:11663]

Location

Chromosome 11: 63,704,371-63,783,546 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 5 transcripts (splice variants), 258 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000110312.1	RTN3-202	4963	1032aa	ENSPTRP00000063222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFS0 A0A6D2WBU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000007099.5	RTN3-204	4930	1013aa	ENSPTRP00000006551.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XFK3 H2Q3Y4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097568.1	RTN3-201	2643	241aa	ENSPTRP00000078085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WHA7 K7BB85	-
ENSPTRT00000045462.3	RTN3-203	2632	255aa	ENSPTRP00000043770.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y4D2 H2R2C9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000093002.1	RTN3-205	630	209aa	ENSPTRP00000082481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZQ6	-

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Summary

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