Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: USP47 ENSPTRG00000003367

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Description

ubiquitin specific peptidase 47 [Source:VGNC Symbol;Acc:VGNC:945]

Location

Chromosome 11: 11,724,399-11,841,672 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000066998.3	USP47-201	7919	1375aa	ENSPTRP00000058577.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WX15 H2RDB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108453.1	USP47-202	7817	1355aa	ENSPTRP00000082267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZ88 A0A6D2XTV4	-
ENSPTRT00000083601.1	USP47-203	7613	1287aa	ENSPTRP00000090524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WGZ7 K7DB81	-
ENSPTRT00000106159.1	USP47-204	4041	1346aa	ENSPTRP00000091912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRR1	-
ENSPTRT00000090055.1	USP47-205	3783	1260aa	ENSPTRP00000091080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPB3	-
ENSPTRT00000076540.1	USP47-206	1311	436aa	ENSPTRP00000088051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFR3	-

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Summary

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