Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STAMBPL1 ENSPTRG00000002727

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Description

STAM binding protein like 1 [Source:VGNC Symbol;Acc:VGNC:5791]

Location

Chromosome 10: 90,115,325-90,208,886 forward strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108990.1	STAMBPL1-204	1386	461aa	ENSPTRP00000063854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGS2 A0A6D2WWU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000101178.1	STAMBPL1-203	3008	436aa	ENSPTRP00000062060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMH2 H2Q285	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000005147.6	STAMBPL1-201	2402	436aa	ENSPTRP00000004758.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMH2 H2Q285	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000097424.1	STAMBPL1-202	1798	436aa	ENSPTRP00000073408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMH2 H2Q285	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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