Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP54 ENSPTRG00000002632

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Description

ubiquitin specific peptidase 54 [Source:VGNC Symbol;Acc:VGNC:5873]

Location

Chromosome 10: 74,697,939-74,802,666 reverse strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 2 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000004952.5	USP54-201	6985	1684aa	ENSPTRP00000004570.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W378 H2Q238	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088376.1	USP54-202	3266	725aa	ENSPTRP00000075362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEQ3 A0A6D2XMS7	-

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Summary

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