Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COPA ENSPTRG00000001549

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Description

COPI coat complex subunit alpha [Source:VGNC Symbol;Acc:VGNC:5021]

Location

Chromosome 1: 138,432,945-138,487,242 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 3 transcripts (splice variants), 216 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002831.6	COPA-201	4973	1233aa	ENSPTRP00000002599.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W8Z2 H2Q0E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000110181.1	COPA-203	2763	920aa	ENSPTRP00000092795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TU50	-
ENSPTRT00000102720.1	COPA-202	2010	669aa	ENSPTRP00000089595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJY9	-

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Summary

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