Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBAP2L ENSPTRG00000001379

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Description

ubiquitin associated protein 2 like [Source:VGNC Symbol;Acc:VGNC:1713]

Location

Chromosome 1: 132,291,117-132,342,735 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077136.1	UBAP2L-205	3333	1110aa	ENSPTRP00000089861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000084210.1	UBAP2L-203	3995	1079aa	ENSPTRP00000092724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TU13 A0A6D2Y2V0	-
ENSPTRT00000044012.4	UBAP2L-202	3982	1087aa	ENSPTRP00000045738.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y0G5 H2R3M4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000101707.1	UBAP2L-201	3636	983aa	ENSPTRP00000084101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y409 K7CTU7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000105870.1	UBAP2L-204	2955	984aa	ENSPTRP00000081170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SX60	-

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Summary

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