tropomyosin 3 [Source:VGNC Symbol;Acc:VGNC:1697]
Chromosome 1: 132,227,969-132,263,704 reverse strand.
Pan_tro_3.0:CM000314.3
This gene has 8 transcripts (splice variants), 56 orthologues and 11 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000101240.1 | TPM3-204 | 2328 | 285aa | ENSPTRP00000084259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3T4U6 A0A6D2XQG1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000105726.1 | TPM3-201 | 3482 | 247aa | ENSPTRP00000071116.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S2P6 A0A6D2X1Y7 | - |
| ENSPTRT00000094257.1 | TPM3-202 | 3482 | 247aa | ENSPTRP00000092863.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TUK0 A0A6D2WKY6 | - |
| ENSPTRT00000107451.1 | TPM3-203 | 2233 | 248aa | ENSPTRP00000088379.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3THN2 A0A6D2WCT2 | - |
| ENSPTRT00000002521.6 | TPM3-206 | 1515 | 285aa | ENSPTRP00000002318.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2Y8M3 H2Q049 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000090447.1 | TPM3-207 | 825 | 274aa | ENSPTRP00000066590.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RPL2 | - |
| ENSPTRT00000105623.1 | TPM3-208 | 780 | 259aa | ENSPTRP00000081030.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SVN5 | - |
| ENSPTRT00000108132.1 | TPM3-205 | 684 | 227aa | ENSPTRP00000070178.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S0S5 A0A6D2XHX9 | - |
