Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SGIP1 ENSPTRG00000000832

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Description

SH3GL interacting endocytic adaptor 1 [Source:VGNC Symbol;Acc:VGNC:10998]

Location

Chromosome 1: 66,521,441-66,731,776 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 5 transcripts (splice variants), 283 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000059123.4	SGIP1-202	2580	859aa	ENSPTRP00000052225.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XDL7 H2R904	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000098382.1	SGIP1-203	2487	828aa	ENSPTRP00000062557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RD42 A0A6D2XC55	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086228.1	SGIP1-204	2379	792aa	ENSPTRP00000062080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBQ8	-
ENSPTRT00000100495.1	SGIP1-205	2307	768aa	ENSPTRP00000079273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQH9	-
ENSPTRT00000091866.1	SGIP1-201	2294	631aa	ENSPTRP00000083942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3Z1 A0A6D2XMS9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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